PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.B01847.1.p
Common NameLOC105963888, MIMGU_mgv1a010015mg
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family WRKY
Protein Properties Length: 325aa    MW: 36454.4 Da    PI: 5.7065
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.B01847.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY87.71e-27127187259
                       --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
              WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                        DgynWrKYGqK++ g+ +pr+YYrCt++   gC ++k+v++++edp+++e++Y+g+H + 
  Migut.B01847.1.p 127 GDGYNWRKYGQKVILGAIHPRAYYRCTHRntqGCLATKHVQKADEDPSIFEVVYSGKHSCM 187
                       5***************************98889*************************985 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5081123.009121185IPR003657WRKY domain
Gene3DG3DSA:2.20.25.801.5E-26126187IPR003657WRKY domain
SuperFamilySSF1182904.05E-24126186IPR003657WRKY domain
SMARTSM007744.8E-37126188IPR003657WRKY domain
PfamPF031062.4E-25128186IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 325 aa     Download sequence    Send to blast
MGAIGSWDRT TVVSVLTEGR ERANELKNQL HPAISSIEAC DVLLESILSS YENALHLLDH  60
MSQLKNSCLS SQIVTANSFD ASPISEGSHQ NSKDHHQIHK SKKRKTLPKW SEHVRISSGA  120
GFEGQIGDGY NWRKYGQKVI LGAIHPRAYY RCTHRNTQGC LATKHVQKAD EDPSIFEVVY  180
SGKHSCMQER SKPKKENPIV LKKEEEQEEA IEKSPKPQKQ ETGTKNDRLP SFSFHSTPIE  240
SENFETQLFS DPGNFSGTPF MSPATSESYF SMNDFGVCLQ SSESDFTEII SNPTPFTDFT  300
FGDLDFSIDQ VDFDSHFLDA PEYF*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2lex_A4e-141261851773Probable WRKY transcription factor 4
1wj2_A4e-141261851773Probable WRKY transcription factor 4
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012843825.10.0PREDICTED: probable WRKY transcription factor 41
TrEMBLA0A022QU550.0A0A022QU55_ERYGU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA55532237
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G11070.16e-43WRKY family protein